BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D02SP1|AL428709
(864 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1721 1710 0.0
>3x_Contig1721
Length = 17834
Score = 1710 bits (862), Expect = 0.0
Identities = 863/864 (99%)
Strand = Plus / Minus
Query: 1 ccatactgcacaagttttagatactgattttagtccatttaacgatcatattgtcgcgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4636 ccatactgcacaagttttagatactgattttagtccatttaacgatcatattgtcgcgtc 4577
Query: 61 tggctctgacgatggaaaaatcggtatctgggagattcctgaagattatggtctacatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4576 tggctctgacgatggaaaaatcggtatctgggagattcctgaagattatggtctacatga 4517
Query: 121 atacgtcgatgaggagggaaatcccaaggacctgaaacctgtcagaatgctatctggtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4516 atacgtcgatgaggagggaaatcccaaggacctgaaacctgtcagaatgctatctggtca 4457
Query: 181 ttcacggaaggttggccatctattgttccatcctcttgccgaaaacattcttgcttcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4456 ttcacggaaggttggccatctattgttccatcctcttgccgaaaacattcttgcttcatc 4397
Query: 241 ttccttagattatacagtcaagatttgggacatctctcaagaagaggtgaagtttacttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4396 ttccttagattatacagtcaagatttgggacatctctcaagaagaggtgaagtttacttt 4337
Query: 301 aaagcatccagatatggttacatctatgtccttcagctatgatggtaaacatttggtgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4336 aaagcatccagatatggttacatctatgtccttcagctatgatggtaaacatttggtgac 4277
Query: 361 agtctcccgcgacaagaagttaagagtgtgggatgtaagarcggagaaaattgttagtga 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4276 agtctcccgcgacaagaagttaagagtgtgggatgtaagagcggagaaaattgttagtga 4217
Query: 421 gggcccagcacattccggtgccaagaaccagagagtggtatggttaggtgacaccgataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4216 gggcccagcacattccggtgccaagaaccagagagtggtatggttaggtgacaccgataa 4157
Query: 481 agttgctactactgggttttccagattgagtgatcgtcagattggtgtctgggatgcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4156 agttgctactactgggttttccagattgagtgatcgtcagattggtgtctgggatgcatt 4097
Query: 541 taatcttgagaagggtaatttgggtggattttataacgttgatcaatcttctggtattct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4096 taatcttgagaagggtaatttgggtggattttataacgttgatcaatcttctggtattct 4037
Query: 601 aatgccattctatgatgattcgaataggattctatacgttgctggaaaaggtgatggtaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4036 aatgccattctatgatgattcgaataggattctatacgttgctggaaaaggtgatggtaa 3977
Query: 661 tattcgttacttcgagttccaaaacgatgaattatatgagttatcggagtaccagtccac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3976 tattcgttacttcgagttccaaaacgatgaattatatgagttatcggagtaccagtccac 3917
Query: 721 tgaacctcagagaggttttgcagtagctccaaaaagatctgtaaatgtgaaggagaatga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3916 tgaacctcagagaggttttgcagtagctccaaaaagatctgtaaatgtgaaggagaatga 3857
Query: 781 agtgttgaaggcttataaagctgtaggtgaacacgccgttgaaccgatttctttctatgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3856 agtgttgaaggcttataaagctgtaggtgaacacgccgttgaaccgatttctttctatgt 3797
Query: 841 gcctagaaagtccgaggttttcca 864
||||||||||||||||||||||||
Sbjct: 3796 gcctagaaagtccgaggttttcca 3773
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5134
Number of Sequences: 1807
Number of extensions: 5134
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 864
length of database: 10,358,551
effective HSP length: 16
effective length of query: 848
effective length of database: 10,329,639
effective search space: 8759533872
effective search space used: 8759533872
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)